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» On Timed Models of Gene Networks
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2004
ACM
14 years 1 months ago
A Performance and Scalability Analysis of the BlueGene/L Architecture
This paper is structured as follows. Section 2 gives an architectural description of BlueGene/L. Section 3 analyzes the issue of “computational noise” – the effect that the o...
Kei Davis, Adolfy Hoisie, Greg Johnson, Darren J. ...
BMCBI
2008
163views more  BMCBI 2008»
13 years 8 months ago
i-SEGOPubmed: a web interface for semantic enabled browsing of PubMed using Gene Ontology
imately 20 million abstracts. Browsing such a huge repository to find relevant information as well as providing elearning service requires new generation of interfaces. Methods suc...
Mohammed Yeasin, Bhanu Vanteru, Jahangheer S. Shai...
BIBE
2006
IEEE
184views Bioinformatics» more  BIBE 2006»
14 years 2 months ago
A Language Modeling Text Mining Approach to the Annotation of Protein Community
This paper discusses an ontology based language modeling text mining approach to the annotation of protein community. Communities appear to play an important role in the functional...
Xiaodan Zhang, Daniel Duanqing Wu, Xiaohua Zhou, X...
BMCBI
2008
129views more  BMCBI 2008»
13 years 8 months ago
Motif-directed network component analysis for regulatory network inference
Background: Network Component Analysis (NCA) has shown its effectiveness in discovering regulators and inferring transcription factor activities (TFAs) when both microarray data a...
Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Wan...
CORR
2008
Springer
115views Education» more  CORR 2008»
13 years 8 months ago
Positive circuits and maximal number of fixed points in discrete dynamical systems
We consider a product X of n finite intervals of integers, a map F from X to itself, the asynchronous state transition graph (F) on X that Thomas proposed as a model for the dynam...
Adrien Richard