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BMCBI
2010
172views more  BMCBI 2010»
13 years 4 months ago
Nonparametric identification of regulatory interactions from spatial and temporal gene expression data
Background: The correlation between the expression levels of transcription factors and their target genes can be used to infer interactions within animal regulatory networks, but ...
Anil Aswani, Soile V. E. Keränen, James Brown...
BMCBI
2011
13 years 23 days ago
PeakRanger: A cloud-enabled peak caller for ChIP-seq data
Background: Chromatin immunoprecipitation (ChIP), coupled with massively parallel short-read sequencing (seq) is used to probe chromatin dynamics. Although there are many algorith...
Xin Feng, Robert Grossman, Lincoln Stein
EUROSYS
2011
ACM
13 years 20 days ago
Striking a new balance between program instrumentation and debugging time
Although they are helpful in many cases, state-of-the-art bug reporting systems may impose excessive overhead on users, leak private information, or provide little help to the dev...
Olivier Crameri, Ricardo Bianchini, Willy Zwaenepo...
VEE
2005
ACM
218views Virtualization» more  VEE 2005»
14 years 2 months ago
The pauseless GC algorithm
Modern transactional response-time sensitive applications have run into practical limits on the size of garbage collected heaps. The heap can only grow until GC pauses exceed the ...
Cliff Click, Gil Tene, Michael Wolf
OTM
2005
Springer
14 years 2 months ago
GeRoMe: A Generic Role Based Metamodel for Model Management
Abstract. The goal of Model Management is the development of new technologies and mechanisms to support the integration, evolution and matching of models. Such tasks are to be perf...
David Kensche, Christoph Quix, Mohamed Amine Chatt...