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» On numbers of Davenport-Schinzel sequences
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BIBM
2010
IEEE
139views Bioinformatics» more  BIBM 2010»
13 years 4 months ago
Scalable, updatable predictive models for sequence data
The emergence of data rich domains has led to an exponential growth in the size and number of data repositories, offering exciting opportunities to learn from the data using machin...
Neeraj Koul, Ngot Bui, Vasant Honavar
BMCBI
2005
198views more  BMCBI 2005»
13 years 7 months ago
Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
BMCBI
2011
13 years 2 months ago
Flexible taxonomic assignment of ambiguous sequencing reads
Background: To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference ...
José Carlos Clemente, Jesper Jansson, Gabri...
JSC
2007
104views more  JSC 2007»
13 years 7 months ago
Summation algorithms for Stirling number identities
We consider a class of sequences defined by triangular recurrence equations. This class contains Stirling numbers and Eulerian numbers of both kinds, and hypergeometric multiples...
Manuel Kauers
ICDE
1995
IEEE
118views Database» more  ICDE 1995»
14 years 8 months ago
A Version Numbering Scheme with a Useful Lexicographical Order
We describe a numbering scheme for versions with alternatives that has a useful lexicographical ordering. The version hierarchy is a tree. By inspection of the version numbers, we...
Arthur M. Keller, Jeffrey D. Ullman