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» On numbers of Davenport-Schinzel sequences
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SAC
2010
ACM
13 years 7 months ago
FANGS: high speed sequence mapping for next generation sequencers
Next Generation Sequencing machines are generating millions of short DNA sequences (reads) everyday. There is a need for efficient algorithms to map these sequences to the referen...
Sanchit Misra, Ramanathan Narayanan, Simon Lin, Al...
IPPS
2010
IEEE
13 years 5 months ago
pFANGS: Parallel high speed sequence mapping for Next Generation 454-roche Sequencing reads
Millions of DNA sequences (reads) are generated by Next Generation Sequencing machines everyday. There is a need for high performance algorithms to map these sequences to the refer...
Sanchit Misra, Ramanathan Narayanan, Wei-keng Liao...
ISMB
1997
13 years 8 months ago
Prediction of Enzyme Classification from Protein Sequence without the Use of Sequence Similarity
1 W’edescribe a novel approach for predicting the function of a protein from its amino-acid sequence. Given features that can be computedfrom the amino-acid sequence in a straigh...
Marie desJardins, Peter D. Karp, Markus Krummenack...
JUCS
2006
114views more  JUCS 2006»
13 years 7 months ago
Pseudorandom Number Generation: Impossibility and Compromise
Abstract: Pseudorandom number generators are widely used in the area of simulation. Defective generators are still widely used in standard library programs, although better pseudor...
Makoto Matsumoto, Mutsuo Saito, Hiroshi Haramoto, ...
CSC
2006
13 years 8 months ago
On the Number of Minimal Addition Chains
An addition chain for a natural number n is a sequence 1 = a0 < a1 < . . . < ar = n of numbers such that for each 0 < i r, ai = aj + ak for some 0 k j < i. Thurbe...
Hatem M. Bahig