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    BMCBI
    2004
    146views more  BMCBI 2004»
    Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
    13 years 8 months ago
    Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
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    Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
    Feng Gao, Barrett C. Foat, Harmen J. Bussemaker
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    BMCBI
    2004
    167views more  BMCBI 2004»
    Feature selection for splice site prediction: A new method using EDA-based feature ranking
    13 years 8 months ago
    Feature selection for splice site prediction: A new method using EDA-based feature ranking
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    Background: The identification of relevant biological features in large and complex datasets is an important step towards gaining insight in the processes underlying the data. Oth...
    Yvan Saeys, Sven Degroeve, Dirk Aeyels, Pierre Rou...
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    BMCBI
    2004
    114views more  BMCBI 2004»
    HMM Logos for visualization of protein families
    13 years 8 months ago
    HMM Logos for visualization of protein families
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    Background: Profile Hidden Markov Models (pHMMs) are a widely used tool for protein family research. Up to now, however, there exists no method to visualize all of their central a...
    Benjamin Schuster-Böckler, Jörg Schultz,...
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    BMCBI
    2004
    114views more  BMCBI 2004»
    Extending the mutual information measure to rank inferred literature relationships
    13 years 8 months ago
    Extending the mutual information measure to rank inferred literature relationships
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    Background: Within the peer-reviewed literature, associations between two things are not always recognized until commonalities between them become apparent. These commonalities ca...
    Jonathan D. Wren
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    CCE
    2004
    108views Software Engineering» more  CCE 2004»
    Improving convergence of the stochastic decomposition algorithm by using an efficient sampling technique
    13 years 8 months ago
    Improving convergence of the stochastic decomposition algorithm by using an efficient sampling technique
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    This work focuses on the basic stochastic decomposition (SD) algorithm of Higle and Sen [J.L. Higle, S. Sen, Stochastic Decomposition, Kluwer Academic Publishers, 1996] for two-st...
    José María Ponce-Ortega, Vicente Ric...
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