As bioinformatics is an emerging application of high performance computing, this paper first evaluates the memory performance of several representative bioinformatics application...
Guangming Tan, Lin Xu, Shengzhong Feng, Ninghui Su...
One of the most fundamental problems automatic parallelization tools are confronted with is to find an optimal domain decomposition for a given application. For regular domain prob...
MPI provides a portable message passing interface for many parallel execution platforms but may lead to inefficiencies for some platforms and applications. In this article we sho...
Compiler optimizations are often driven by specific assumptions about the underlying architecture and implementation of the target machine. For example, when targeting shared-mem...
Jack L. Lo, Susan J. Eggers, Henry M. Levy, Sujay ...
As the number of I/O-intensive MPI programs becomes increasingly large, many efforts have been made to improve I/O performance, on both software and architecture sides. On the sof...