Sciweavers

282 search results - page 24 / 57
» On predicting secondary structure transition
Sort
View
CONEXT
2010
ACM
13 years 6 months ago
The Internet is flat: modeling the transition from a transit hierarchy to a peering mesh
Recent measurements and anecdotal evidence indicate that the Internet ecosystem is rapidly evolving from a multi-tier hierarchy built mostly with transit (customer-provider) links...
Amogh Dhamdhere, Constantine Dovrolis
JCB
2000
129views more  JCB 2000»
13 years 8 months ago
Prediction of RNA Base Pairing Probabilities on Massively Parallel Computers
We present an implementation of McCaskill's algorithm for computing the base pair probabilities of an RNA molecule for massively parallel message passing architectures. The p...
Martin Fekete, Ivo L. Hofacker, Peter F. Stadler
IPPS
2007
IEEE
14 years 3 months ago
RNAVLab: A unified environment for computational RNA structure analysis based on grid computing technology
Ribonucleic acid (RNA) molecules play important roles in many biological processes including gene expression and regulation. An RNA molecule is a linear polymer which folds back o...
Michela Taufer, Ming-Ying Leung, Kyle L. Johnson, ...
ISMB
1993
13 years 10 months ago
Protein Structure Prediction: Selecting Salient Features from Large Candidate Pools
Weintroduce a parallel approach, "DT-SELECT," for selecting features used by inductive learning algorithms to predict protein secondary structure. DT-SELECTis able to ra...
Kevin J. Cherkauer, Jude W. Shavlik
BMCBI
2004
73views more  BMCBI 2004»
13 years 8 months ago
Use of a structural alphabet for analysis of short loops connecting repetitive structures
Background: Because loops connect regular secondary structures, analysis of the former depends directly on the definition of the latter. The numerous assignment methods, however, ...
Laurent Fourrier, Cristina Benros, Alexandre G. de...