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» On predicting secondary structure transition
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BMCBI
2008
72views more  BMCBI 2008»
13 years 9 months ago
HECTAR: A method to predict subcellular targeting in heterokonts
Background: The heterokonts are a particularly interesting group of eukaryotic organisms; they include many key species of planktonic and coastal algae and several important patho...
Bernhard Gschloessl, Yann Guermeur, J. Mark Cock
BMCBI
2011
13 years 11 days ago
Dissecting protein loops with a statistical scalpel suggests a functional implication of some structural motifs
Background: One of the strategies for protein function annotation is to search particular structural motifs that are known to be shared by proteins with a given function. Results:...
Leslie Regad, Juliette Martin, Anne-Claude Camprou...
BMCBI
2005
162views more  BMCBI 2005»
13 years 8 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes
NIPS
2008
13 years 10 months ago
On Computational Power and the Order-Chaos Phase Transition in Reservoir Computing
Randomly connected recurrent neural circuits have proven to be very powerful models for online computations when a trained memoryless readout function is appended. Such Reservoir ...
Benjamin Schrauwen, Lars Buesing, Robert A. Legens...
AAAI
2011
12 years 8 months ago
Exploiting Phase Transition in Latent Networks for Clustering
In this paper, we model the pair-wise similarities of a set of documents as a weighted network with a single cutoff parameter. Such a network can be thought of an ensemble of unwe...
Vahed Qazvinian, Dragomir R. Radev