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STOC
1996
ACM
115views Algorithms» more  STOC 1996»
14 years 2 months ago
Minimum Cuts in Near-Linear Time
We significantly improve known time bounds for solving the minimum cut problem on undirected graphs. We use a "semiduality" between minimum cuts and maximum spanning tree...
David R. Karger
LREC
2010
150views Education» more  LREC 2010»
13 years 12 months ago
Design, Compilation, and Preliminary Analyses of Balanced Corpus of Contemporary Written Japanese
Compilation of a 100 million words balanced corpus called the Balanced Corpus of Contemporary Written Japanese (or BCCWJ) is underway at the National Institute for Japanese Langua...
Kikuo Maekawa, Makoto Yamazaki, Takehiko Maruyama,...
HPDC
2010
IEEE
13 years 11 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
BMCBI
2010
139views more  BMCBI 2010»
13 years 10 months ago
PoGO: Prediction of Gene Ontology terms for fungal proteins
Background: Automated protein function prediction methods are the only practical approach for assigning functions to genes obtained from model organisms. Many of the previously re...
Jaehee Jung, Gangman Yi, Serenella A. Sukno, Micha...
BMCBI
2010
142views more  BMCBI 2010»
13 years 10 months ago
Classification of protein sequences by means of irredundant patterns
Background: The classification of protein sequences using string algorithms provides valuable insights for protein function prediction. Several methods, based on a variety of diff...
Matteo Comin, Davide Verzotto