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BMCBI
2006
108views more  BMCBI 2006»
13 years 9 months ago
Probe set algorithms: is there a rational best bet?
Affymetrix microarrays have become a standard experimental platform for studies of mRNA expression profiling. Their success is due, in part, to the multiple oligonucleotide featur...
Jinwook Seo, Eric P. Hoffman
BMCBI
2006
93views more  BMCBI 2006»
13 years 9 months ago
A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database
Background: Many of the most popular pre-processing methods for Affymetrix expression arrays, such as RMA, gcRMA, and PLIER, simultaneously analyze data across a set of predetermi...
Simon Katz, Rafael A. Irizarry, Xue Lin, Mark Trip...
BMCBI
2006
113views more  BMCBI 2006»
13 years 9 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida
CN
2006
113views more  CN 2006»
13 years 9 months ago
Failure recovery for structured p2p networks: Protocol design and performance under churn
Measurement studies indicate a high rate of node dynamics in p2p systems. In this paper, we address the question of how high a rate of node dynamics can be supported by structured...
Simon S. Lam, Huaiyu Liu
COMCOM
2006
129views more  COMCOM 2006»
13 years 9 months ago
An adaptive mobility anchor point selection scheme in Hierarchical Mobile IPv6 networks
In Hierarchical Mobile IPv6 (HMIPv6) networks, the mobility anchor point (MAP) is introduced to localize binding update messages destined to the home agent. In a large-scale wirel...
Sangheon Pack, Minji Nam, Taekyoung Kwon, Yanghee ...
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