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» On some Properties of DNA Graphs
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RECOMB
2010
Springer
14 years 2 months ago
Genomic DNA k-mer Spectra: Models and Modalities
Background: The empirical frequencies of DNA k-mers in whole genome sequences provide an interesting perspective on genomic complexity, and the availability of large segments of g...
Benny Chor, David Horn, Nick Goldman, Yaron Levy, ...
INFOCOM
2008
IEEE
14 years 2 months ago
Complex Network Measurements: Estimating the Relevance of Observed Properties
Abstract—Complex networks, modeled as large graphs, received much attention during these last years. However, data on such networks is only available through intricate measuremen...
Matthieu Latapy, Clémence Magnien
WABI
2007
Springer
139views Bioinformatics» more  WABI 2007»
14 years 2 months ago
Computability of Models for Sequence Assembly
Graph-theoretic models have come to the forefront as some of the most powerful and practical methods for sequence assembly. Simultaneously, the computational hardness of the underl...
Paul Medvedev, Konstantinos Georgiou, Gene Myers, ...
CORR
2010
Springer
198views Education» more  CORR 2010»
13 years 4 months ago
Convex Graph Invariants
The structural properties of graphs are usually characterized in terms of invariants, which are functions of graphs that do not depend on the labeling of the nodes. In this paper ...
Venkat Chandrasekaran, Pablo A. Parrilo, Alan S. W...
STOC
2009
ACM
152views Algorithms» more  STOC 2009»
14 years 2 months ago
Green's conjecture and testing linear-invariant properties
A system of linear equations in p unknowns Mx = b is said to have the removal property if every set S ⊆ {1, . . . , n} which contains o(np− ) solutions of Mx = b can be turned...
Asaf Shapira