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» On the Comparability of Software Clustering Algorithms
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WOB
2004
233views Bioinformatics» more  WOB 2004»
13 years 9 months ago
Recent Advances in Gene Expression Data Clustering: A Case Study with Comparative Results
Several advanced techniques have been proposed for data clustering and many of them have been applied to gene expression data, with partial success. The high dimensionality and the...
George Barreto Bezerra, Geraldo M. A. Cança...
CPM
2005
Springer
109views Combinatorics» more  CPM 2005»
14 years 1 months ago
Using PQ Trees for Comparative Genomics
Permutations on strings representing gene clusters on genomes have been studied earlier in [18, 14, 3, 12, 17] and the idea of a maximal permutation pattern was introduced in [12]....
Gad M. Landau, Laxmi Parida, Oren Weimann
SC
2009
ACM
14 years 13 days ago
Comparative study of one-sided factorizations with multiple software packages on multi-core hardware
The emergence and continuing use of multi-core architectures require changes in the existing software and sometimes even a redesign of the established algorithms in order to take ...
Emmanuel Agullo, Bilel Hadri, Hatem Ltaief, Jack D...
CIDM
2009
IEEE
14 years 14 days ago
An architecture and algorithms for multi-run clustering
—This paper addresses two main challenges for clustering which require extensive human effort: selecting appropriate parameters for an arbitrary clustering algorithm and identify...
Rachsuda Jiamthapthaksin, Christoph F. Eick, Vadee...
BCB
2010
138views Bioinformatics» more  BCB 2010»
13 years 2 months ago
Comparative analysis of biclustering algorithms
Biclustering is a very popular method to identify hidden co-regulation patterns among genes. There are numerous biclustering algorithms designed to undertake this challenging task...
Doruk Bozdag, Ashwin S. Kumar, Ümit V. &Ccedi...