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BMCBI
2008
117views more  BMCBI 2008»
13 years 10 months ago
RNACompress: Grammar-based compression and informational complexity measurement of RNA secondary structure
Background: With the rapid emergence of RNA databases and newly identified non-coding RNAs, an efficient compression algorithm for RNA sequence and structural information is neede...
Qi Liu, Yu Yang, Chun Chen, Jiajun Bu, Yin Zhang, ...
BMCBI
2010
150views more  BMCBI 2010»
13 years 10 months ago
MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure
Background: The reconstruction of protein complexes from the physical interactome of organisms serves as a building block towards understanding the higher level organization of th...
Sriganesh Srihari, Kang Ning, Hon Wai Leong
BMCBI
2008
175views more  BMCBI 2008»
13 years 10 months ago
Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces
Background: Protein-protein interactions are ubiquitous and essential for all cellular processes. High-resolution X-ray crystallographic structures of protein complexes can reveal...
Andrew J. Bordner, Andrey A. Gorin
CORR
2010
Springer
89views Education» more  CORR 2010»
13 years 10 months ago
An Oracle Strongly Separating Deterministic Time from Nondeterministic Time, via Kolmogorov Complexity
Hartmanis used Kolmogorov complexity to provide an alternate proof of the classical result of Baker, Gill, and Solovay that there is an oracle relative to which P is not NP. We re...
David Doty
CORR
2008
Springer
104views Education» more  CORR 2008»
13 years 10 months ago
New bounds on classical and quantum one-way communication complexity
In this paper we provide new bounds on classical and quantum distributional communication complexity in the two-party, one-way model of communication. In the classical one-way mode...
Rahul Jain, Shengyu Zhang