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» On the Complexity of Register Coalescing
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BMCBI
2005
163views more  BMCBI 2005»
13 years 7 months ago
CoaSim: A flexible environment for simulating genetic data under coalescent models
Background: Coalescent simulations are playing a large role in interpreting large scale intraspecific sequence or polymorphism surveys and for planning and evaluating association ...
Thomas Mailund, Mikkel H. Schierup, Christian N. S...
ACMMSP
2004
ACM
92views Hardware» more  ACMMSP 2004»
14 years 28 days ago
Instruction combining for coalescing memory accesses using global code motion
Instruction combining is an optimization to replace a sequence of instructions with a more efficient instruction yielding the same result in a fewer machine cycles. When we use it...
Motohiro Kawahito, Hideaki Komatsu, Toshio Nakatan...
BMCBI
2007
152views more  BMCBI 2007»
13 years 7 months ago
Recodon: Coalescent simulation of coding DNA sequences with recombination, migration and demography
Background: Coalescent simulations have proven very useful in many population genetics studies. In order to arrive to meaningful conclusions, it is important that these simulation...
Miguel Arenas, David Posada
IJDMB
2010
61views more  IJDMB 2010»
13 years 6 months ago
On a novel coalescent model for genome-wide evolution of Copy Number Variations
: Since we are limited in our knowledge of human demographic history and variations of recombination and mutation rates, large-scale computer simulation is a necessary tool in gene...
Antonina Mitrofanova, Bhubaneswar (Bud) Mishra
JCB
2007
145views more  JCB 2007»
13 years 7 months ago
Confounding Factors in HGT Detection: Statistical Error, Coalescent Effects, and Multiple Solutions
Prokaryotic organisms share genetic material across species boundaries by means of a process known as horizontal gene transfer (HGT). This process has great significance for unde...
Cuong Than, Derek A. Ruths, Hideki Innan, Luay Nak...