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» On the Distance of Databases
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BMCBI
2008
122views more  BMCBI 2008»
13 years 7 months ago
Grammar-based distance in progressive multiple sequence alignment
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
David J. Russell, Hasan H. Otu, Khalid Sayood
BMCBI
2010
121views more  BMCBI 2010»
13 years 5 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
SIGMOD
2009
ACM
134views Database» more  SIGMOD 2009»
14 years 7 months ago
Extending autocompletion to tolerate errors
Autocompletion is a useful feature when a user is doing a look up from a table of records. With every letter being typed, autocompletion displays strings that are present in the t...
Surajit Chaudhuri, Raghav Kaushik
CGA
2006
13 years 7 months ago
The Distance-Similarity Metaphor in Region-Display Spatializations
n explore and understand abstract information spaces as if they were real geographic spaces. According to the distance-similarity metaphor1 one of the most popular spatial metaphor...
Sara Irina Fabrikant, Daniel R. Montello, David M....
KDD
2000
ACM
168views Data Mining» more  KDD 2000»
13 years 11 months ago
Scaling up dynamic time warping for datamining applications
There has been much recent interest in adapting data mining algorithms to time series databases. Most of these algorithms need to compare time series. Typically some variation of ...
Eamonn J. Keogh, Michael J. Pazzani