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BMCBI
2006
140views more  BMCBI 2006»
13 years 8 months ago
SNP-PHAGE - High throughput SNP discovery pipeline
Background: Single nucleotide polymorphisms (SNPs) as defined here are single base sequence changes or short insertion/deletions between or within individuals of a given species. ...
Lakshmi K. Matukumalli, John J. Grefenstette, Davi...
BMCBI
2006
116views more  BMCBI 2006»
13 years 8 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick
TASLP
2008
176views more  TASLP 2008»
13 years 8 months ago
Analysis of Minimum Distances in High-Dimensional Musical Spaces
Abstract--We propose an automatic method for measuring content-based music similarity, enhancing the current generation of music search engines and recommender systems. Many previo...
Michael Casey, Christophe Rhodes, Malcolm Slaney
BMCBI
2005
159views more  BMCBI 2005»
13 years 8 months ago
Columba: an integrated database of proteins, structures, and annotations
Background: Structural and functional research often requires the computation of sets of protein structures based on certain properties of the proteins, such as sequence features,...
Silke Trißl, Kristian Rother, Heiko Mül...
BMCBI
2004
162views more  BMCBI 2004»
13 years 8 months ago
Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant m
Background: Modern developmental biology relies heavily on the analysis of embryonic gene expression patterns. Investigators manually inspect hundreds or thousands of expression p...
Rajalakshmi Gurunathan, Bernard Van Emden, Sethura...