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» On the Expressiveness and Complexity of ATL
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BMCBI
2008
178views more  BMCBI 2008»
13 years 8 months ago
Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
Background: The DNA microarray technology allows the measurement of expression levels of thousands of genes under tens/hundreds of different conditions. In microarray data, genes ...
Kin-On Cheng, Ngai-Fong Law, Wan-Chi Siu, Alan Wee...
BMCBI
2006
153views more  BMCBI 2006»
13 years 8 months ago
Discovery of time-delayed gene regulatory networks based on temporal gene expression profiling
Background: It is one of the ultimate goals for modern biological research to fully elucidate the intricate interplays and the regulations of the molecular determinants that prope...
Xia Li, Shaoqi Rao, Wei Jiang, Chuanxing Li, Yun X...
ICDT
2009
ACM
128views Database» more  ICDT 2009»
14 years 9 months ago
Efficient asymmetric inclusion between regular expression types
The inclusion of Regular Expressions (REs) is the kernel of any type-checking algorithm for XML manipulation languages. XML applications would benefit from the extension of REs wi...
Dario Colazzo, Giorgio Ghelli, Carlo Sartiani
DLOG
2008
13 years 10 months ago
Taming the Infinite Chase: Query Answering under Expressive Relational Constraints
Answering queries posed over knowledge bases is a central problem in knowledge representation and database theory. In databases, query containment is one of the important query op...
Andrea Calì, Georg Gottlob, Michael Kifer
BMCBI
2008
204views more  BMCBI 2008»
13 years 8 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...