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BMCBI
2011
13 years 2 months ago
PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment
Background: The Monte Carlo simulation of sequence evolution is routinely used to assess the performance of phylogenetic inference methods and sequence alignment algorithms. Progr...
Botond Sipos, Tim Massingham, Gregory E. Jordan, N...
XIMEP
2006
ACM
179views Database» more  XIMEP 2006»
14 years 1 months ago
Positional Grouping in XQuery
This paper proposes an extension to the XQuery language to solve the problem of positional grouping: that is, problems in which it is necessary to convert a flat sequence into a h...
Michael H. Kay
HPDC
2000
IEEE
14 years 3 days ago
Event Services for High Performance Computing
The Internet and the Grid are changing the face of high performance computing. Rather than tightly-coupled SPMD-style components running in a single cluster, on a parallel machine...
Greg Eisenhauer, Fabián E. Bustamante, Kars...
TLDI
2010
ACM
247views Formal Methods» more  TLDI 2010»
14 years 4 months ago
F-ing modules
ML modules are a powerful language mechanism for decomposing programs into reusable components. Unfortunately, they also have a reputation for being “complex” and requiring fa...
Andreas Rossberg, Claudio V. Russo, Derek Dreyer
ICPP
2008
IEEE
14 years 2 months ago
Solving Large, Irregular Graph Problems Using Adaptive Work-Stealing
Solving large, irregular graph problems efficiently is challenging. Current software systems and commodity multiprocessors do not support fine-grained, irregular parallelism wel...
Guojing Cong, Sreedhar B. Kodali, Sriram Krishnamo...