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CORR
2006
Springer
159views Education» more  CORR 2006»
13 years 7 months ago
Structural Alignments of pseudo-knotted RNA-molecules in polynomial time
An RNA molecule is structured on several layers. The primary and most obvious structure is its sequence of bases, i.e. a word over the alphabet {A, C, G, U}. The higher structure i...
Michael Brinkmeier
IPPS
2003
IEEE
14 years 1 months ago
A Compilation Framework for Distributed Memory Parallelization of Data Mining Algorithms
With the availability of large datasets in a variety of scientific and commercial domains, data mining has emerged as an important area within the last decade. Data mining techni...
Xiaogang Li, Ruoming Jin, Gagan Agrawal
CEC
2010
IEEE
13 years 8 months ago
Sequential DE enhanced by neighborhood search for Large Scale Global Optimization
— In this paper, the performance of a sequential Differential Evolution (DE) enhanced by neighborhood search (SDENS) is reported on the set of benchmark functions provided for th...
Hui Wang, Zhijian Wu, Shahryar Rahnamayan, Dazhi J...
CORR
2011
Springer
167views Education» more  CORR 2011»
13 years 2 months ago
On Quadratic Programming with a Ratio Objective
Quadratic Programming (QP) is the well-studied problem of maximizing over {−1, 1} values the quadratic form i=j aijxixj. QP captures many known combinatorial optimization proble...
Aditya Bhaskara, Moses Charikar, Rajsekar Manokara...
JCC
2008
88views more  JCC 2008»
13 years 7 months ago
A self-organizing algorithm for molecular alignment and pharmacophore development
Abstract: We present a method for simultaneous three-dimensional (3D) structure generation and pharmacophorebased alignment using a self-organizing algorithm called Stochastic Prox...
Deepak Bandyopadhyay, Dimitris K. Agrafiotis