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BMCBI
2005
112views more  BMCBI 2005»
13 years 8 months ago
Integration of the Gene Ontology into an object-oriented architecture
Background: To standardize gene product descriptions, a formal vocabulary defined as the Gene Ontology (GO) has been developed. GO terms have been categorized into biological proc...
Daniel Shegogue, W. Jim Zheng
ICPW
2007
13 years 10 months ago
Rule responder: RuleML-based agents for distributed collaboration on the pragmatic web
The Rule Responder project (responder.ruleml.org) extends the Semantic Web towards a Pragmatic Web infrastructure for collaborative human-computer networks. These allow semi-autom...
Adrian Paschke, Harold Boley, Alexander Kozlenkov,...
CORR
2008
Springer
117views Education» more  CORR 2008»
13 years 8 months ago
Robust Stochastic Chemical Reaction Networks and Bounded Tau-Leaping
The behavior of some stochastic chemical reaction networks is largely unaffected by slight inaccuracies in reaction rates. We formalize the robustness of state probabilities to re...
David Soloveichik
JCB
2007
145views more  JCB 2007»
13 years 8 months ago
Confounding Factors in HGT Detection: Statistical Error, Coalescent Effects, and Multiple Solutions
Prokaryotic organisms share genetic material across species boundaries by means of a process known as horizontal gene transfer (HGT). This process has great significance for unde...
Cuong Than, Derek A. Ruths, Hideki Innan, Luay Nak...
VLDB
2007
ACM
182views Database» more  VLDB 2007»
14 years 2 months ago
Continuous Queries in Oracle
This paper describes Continuous Queries (CQ) in Oracle RDBMS, a feature that incorporates stream and complex event processing into an RDBMS, the first such attempt in commercial d...
Sankar Subramanian, Srikanth Bellamkonda, Hua-Gang...