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STRINGOLOGY
2004
13 years 8 months ago
A Note on Bit-Parallel Alignment Computation
Abstract. The edit distance between strings A and B is defined as the minimum number of edit operations needed in converting A into B or vice versa. Typically the allowed edit oper...
Heikki Hyyrö
SPIRE
2005
Springer
14 years 29 days ago
An Edit Distance Between RNA Stem-Loops
We introduce the notion of conservative edit distance and mapping between two RNA stem-loops. We show that unlike the general edit distance between RNA secondary structures, the co...
Valentin Guignon, Cedric Chauve, Sylvie Hamel
HEURISTICS
2007
103views more  HEURISTICS 2007»
13 years 7 months ago
Distance measures based on the edit distance for permutation-type representations
In this paper, we develop and discuss several distance measures for permutation type representations of solutions of combinatorial optimisation problems. The problems discussed in...
Kenneth Sörensen
CPM
1993
Springer
154views Combinatorics» more  CPM 1993»
13 years 11 months ago
On Suboptimal Alignments of Biological Sequences
It is widely accepted that the optimal alignment between a pair of proteins or nucleic acid sequences that minimizes the edit distance may not necessarily re ect the correct biolog...
Dalit Naor, Douglas L. Brutlag
CAIP
2009
Springer
246views Image Analysis» more  CAIP 2009»
14 years 4 days ago
A Novel Approach for Word Spotting Using Merge-Split Edit Distance
Edit distance matching has been used in literature for word spotting with characters taken as primitives. The recognition rate however, is limited by the segmentation inconsistenci...
Khurram Khurshid, Claudie Faure, Nicole Vincent