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» On the maximum number of edges in quasi-planar graphs
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SPAA
2004
ACM
14 years 23 days ago
Cache-oblivious shortest paths in graphs using buffer heap
We present the Buffer Heap (BH), a cache-oblivious priority queue that supports Delete-Min, Delete, and Decrease-Key operations in O( 1 B log2 N B ) amortized block transfers fro...
Rezaul Alam Chowdhury, Vijaya Ramachandran
STOC
2007
ACM
134views Algorithms» more  STOC 2007»
14 years 7 months ago
Hardness of routing with congestion in directed graphs
Given as input a directed graph on N vertices and a set of source-destination pairs, we study the problem of routing the maximum possible number of source-destination pairs on pat...
Julia Chuzhoy, Venkatesan Guruswami, Sanjeev Khann...
CSB
2004
IEEE
177views Bioinformatics» more  CSB 2004»
13 years 11 months ago
High-Throughput 3D Structural Homology Detection via NMR Resonance Assignment
One goal of the structural genomics initiative is the identification of new protein folds. Sequence-based structural homology prediction methods are an important means for priorit...
Christopher James Langmead, Bruce Randall Donald
SODA
2012
ACM
217views Algorithms» more  SODA 2012»
11 years 9 months ago
Polynomial integrality gaps for strong SDP relaxations of Densest k-subgraph
The Densest k-subgraph problem (i.e. find a size k subgraph with maximum number of edges), is one of the notorious problems in approximation algorithms. There is a significant g...
Aditya Bhaskara, Moses Charikar, Aravindan Vijayar...
ISBRA
2009
Springer
14 years 2 months ago
Untangling Tanglegrams: Comparing Trees by Their Drawings
A tanglegram is a pair of trees on the same set of leaves with matching leaves in the two trees joined by an edge. Tanglegrams are widely used in biology – to compare evolutiona...
Balaji Venkatachalam, Jim Apple, Katherine St. Joh...