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» On the modularity of feature interactions

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BMCBI
2010

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Modular composition predicts kinase/substrate interactions

13 years 7 months ago

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Background: Phosphorylation events direct the flow of signals and metabolites along cellular protein networks. Current annotations of kinase-substrate binding events are far from ...

Yichuan Liu, Aydin Tozeren

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CSB
2005
IEEE

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Functional Modularity in a Large-Scale Mammalian Molecular Interaction Network

14 years 1 months ago

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The Ingenuity™ Pathways Knowledge Base (IPKB) contains over one million ﬁndings manually curated from the scientiﬁc literature. Highly-structured content from the IPKB forms...

Andreas Kramer, Daniel R. Richards, James O. Bowlb...

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SPLC
2010

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A Hybrid Approach to Feature-Oriented Programming in XVCL

13 years 9 months ago

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Feature-Oriented Programming (FOP) is a programming paradigm for developing programs by composing features. It is especially useful for software product line development, as each p...

Hongyu Zhang, Stan Jarzabek

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BIBE
2007
IEEE

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Optimizing Flow-based Modularization by Iterative Centroid Search in Protein Interaction Networks

13 years 7 months ago