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» On the rigidity of molecular graphs
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COCOON
2003
Springer
14 years 26 days ago
On a Conjecture on Wiener Indices in Combinatorial Chemistry
Drugs and other chemical compounds are often modeled as polygonal shapes, where each vertex represents an atom of the molecule, and covalent bonds between atoms are represented by...
Yih-En Andrew Ban, Sergei Bespamyatnikh, Nabil H. ...
FSTTCS
2004
Springer
14 years 1 months ago
Genome Halving Problem Revisited
The Genome Halving Problem is motivated by the whole genome duplication events in molecular evolution that double the gene content of a genome and result in a perfect duplicated ge...
Max A. Alekseyev, Pavel A. Pevzner
FOCS
2002
IEEE
14 years 17 days ago
Learning a Hidden Matching
We consider the problem of learning a matching (i.e., a graph in which all vertices have degree 0 or 1) in a model where the only allowed operation is to query whether a set of ve...
Noga Alon, Richard Beigel, Simon Kasif, Steven Rud...
WOB
2004
134views Bioinformatics» more  WOB 2004»
13 years 9 months ago
Reconstruction of Phylogenetic Trees using the Ant Colony Optimization Paradigm
We developed a new approach for the reconstruction of phylogenetic trees using ant colony optimization metaheuristics.Atree is constructed using a fully connected graph and the pro...
Heitor S. Lopes, Mauricio Perretto
BIB
2007
139views more  BIB 2007»
13 years 7 months ago
Petri net modelling of biological networks
Mathematical modelling is increasingly used to get insights into the functioning of complex biological networks. In this context, Petri nets (PNs) have recently emerged as a promi...
Claudine Chaouiya