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NSDI
2008
13 years 10 months ago
Studying Black Holes in the Internet with Hubble
We present Hubble, a system that operates continuously to find Internet reachability problems in which routes exist to a destination but packets are unable to reach the destinatio...
Ethan Katz-Bassett, Harsha V. Madhyastha, John P. ...
BMCBI
2010
150views more  BMCBI 2010»
13 years 7 months ago
AMS 3.0: prediction of post-translational modifications
Background: We present here the recent update of AMS algorithm for identification of post-translational modification (PTM) sites in proteins based only on sequence information, us...
Subhadip Basu, Dariusz Plewczynski
JBCB
2007
161views more  JBCB 2007»
13 years 7 months ago
On Cooperative Quasi-Equilibrium Models of transcriptional Regulation
Mechanistic models for transcriptional regulation are derived using the methods of equilibrium statistical mechanics, to model equilibrating processes that occur at a fast time sc...
Eric Mjolsness
BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
A neural strategy for the inference of SH3 domain-peptide interaction specificity
Background: The SH3 domain family is one of the most representative and widely studied cases of so-called Peptide Recognition Modules (PRM). The polyproline II motif PxxP that gen...
Enrico Ferraro, Allegra Via, Gabriele Ausiello, Ma...
APIN
2002
121views more  APIN 2002»
13 years 7 months ago
Applying Learning by Examples for Digital Design Automation
This paper describes a new learning by example mechanism and its application for digital circuit design automation. This mechanism uses finite state machines to represent the infer...
Ben Choi