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CLUSTER
2003
IEEE
14 years 1 months ago
A Case Study of Parallel I/O for Biological Sequence Search on Linux Clusters
In this paper we analyze the I/O access patterns of a widely-used biological sequence search tool and implement two variations that employ parallel-I/O for data access based on PV...
Yifeng Zhu, Hong Jiang, Xiao Qin, David R. Swanson
ECCC
2000
140views more  ECCC 2000»
13 years 7 months ago
Randomized Approximation Schemes for Scheduling Unrelated Parallel Machines
We consider the problem of Scheduling n Independent Jobs on m Unrelated Parallel Machines, when the number of machines m is xed. We address the standard problem of minimizing the ...
Pavlos Efraimidis, Paul G. Spirakis
CCGRID
2003
IEEE
14 years 1 months ago
Improved Read Performance in a Cost-Effective, Fault-Tolerant Parallel Virtual File System (CEFT-PVFS)
Due to the ever-widening performance gap between processors and disks, I/O operations tend to become the major performance bottleneck of data-intensive applications on modern clus...
Yifeng Zhu, Hong Jiang, Xiao Qin, Dan Feng, David ...
WEA
2004
Springer
150views Algorithms» more  WEA 2004»
14 years 1 months ago
Increased Bit-Parallelism for Approximate String Matching
Abstract. Bit-parallelism permits executing several operations simultaneously over a set of bits or numbers stored in a single computer word. This technique permits searching for t...
Heikki Hyyrö, Kimmo Fredriksson, Gonzalo Nava...
IPPS
2000
IEEE
14 years 3 days ago
A Requirements Analysis for Parallel KDD Systems
Abstract. The current generation of data mining tools have limited capacity and performance, since these tools tend to be sequential. This paper explores a migration path out of th...
William Maniatty, Mohammed Javeed Zaki