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» Ontology Similarity in the Alignment Space
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BMCBI
2006
163views more  BMCBI 2006»
13 years 7 months ago
Ensemble attribute profile clustering: discovering and characterizing groups of genes with similar patterns of biological featur
Background: Ensemble attribute profile clustering is a novel, text-based strategy for analyzing a userdefined list of genes and/or proteins. The strategy exploits annotation data ...
J. R. Semeiks, A. Rizki, Mina J. Bissell, I. Saira...
ICPR
2010
IEEE
13 years 6 months ago
Learning Non-Linear Dynamical Systems by Alignment of Local Linear Models
Abstract—Learning dynamical systems is one of the important problems in many fields. In this paper, we present an algorithm for learning non-linear dynamical systems which works...
Masao Joko, Yoshinobu Kawahara, Takehisa Yairi
SMC
2007
IEEE
14 years 1 months ago
Sense based organization of descriptive data
— In this paper we propose a new technique allowing to map descriptive data into relative distance space, which is based primarily on senses of the terms stored in our data. We u...
M. Shahriar Hossain, Monika Akbar, Rafal A. Angryk
BMCBI
2008
103views more  BMCBI 2008»
13 years 7 months ago
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
Mallika Veeramalai, Yuzhen Ye, Adam Godzik
BMCBI
2004
125views more  BMCBI 2004»
13 years 7 months ago
A functional hierarchical organization of the protein sequence space
Background: It is a major challenge of computational biology to provide a comprehensive functional classification of all known proteins. Most existing methods seek recurrent patte...
Noam Kaplan, Moriah Friedlich, Menachem Fromer, Mi...