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» Open MPI: A Flexible High Performance MPI
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BMCBI
2010
116views more  BMCBI 2010»
13 years 7 months ago
permGPU: Using graphics processing units in RNA microarray association studies
Background: Many analyses of microarray association studies involve permutation, bootstrap resampling and crossvalidation, that are ideally formulated as embarrassingly parallel c...
Ivo D. Shterev, Sin-Ho Jung, Stephen L. George, Ko...
IPPS
2008
IEEE
14 years 1 months ago
A plug-and-play model for evaluating wavefront computations on parallel architectures
This paper develops a plug-and-play reusable LogGP model that can be used to predict the runtime and scaling behavior of different MPI-based pipelined wavefront applications runni...
Gihan R. Mudalige, Mary K. Vernon, Stephen A. Jarv...
ICPP
2009
IEEE
14 years 2 months ago
LeWI: A Runtime Balancing Algorithm for Nested Parallelism
Abstract—We present LeWI: a novel load balancing algorithm, that can balance applications with very different patterns of imbalance. Our algorithm can balance fine grain imbalan...
Marta Garcia, Julita Corbalán, Jesús...
IPPS
2010
IEEE
13 years 5 months ago
Oversubscription on multicore processors
Abstract: Existing multicore systems already provide deep levels of thread parallelism. Hybrid programming models and composability of parallel libraries are very active areas of r...
Costin Iancu, Steven Hofmeyr, Filip Blagojevic, Yi...
IPPS
1999
IEEE
13 years 11 months ago
Low-Latency Message Passing on Workstation Clusters using SCRAMNet
Clusters of workstations have emerged as a popular platform for parallel and distributed computing. Commodity high speed networks which are used to connect workstation clusters pr...
Vijay Moorthy, Matthew G. Jacunski, Manoj Pillai, ...