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117
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CCS
2010
ACM
15 years 2 months ago
Symbolic security analysis of ruby-on-rails web applications
Many of today's web applications are built on frameworks that include sophisticated defenses against malicious adversaries. However, mistakes in the way developers deploy tho...
Avik Chaudhuri, Jeffrey S. Foster
120
Voted
ICECCS
2010
IEEE
158views Hardware» more  ICECCS 2010»
15 years 2 months ago
A Network Analysis of Stakeholders in Tool Visioning Process for Story Test Driven Development
Participation from all stakeholders is important in a successful software development project, especially if the development project is complex and has many stakeholders. Identify...
Shelly Park, Frank Maurer
122
Voted
BMCBI
2010
114views more  BMCBI 2010»
15 years 2 months ago
Detection of gene orthology from gene co-expression and protein interaction networks
Background: Ortholog detection methods present a powerful approach for finding genes that participate in similar biological processes across different organisms, extending our und...
Fadi Towfic, Susan VanderPlas, Casey A. Oliver, Ol...
BMCBI
2010
123views more  BMCBI 2010»
15 years 2 months ago
Computationally efficient flux variability analysis
Background: Flux variability analysis is often used to determine robustness of metabolic models in various simulation conditions. However, its use has been somehow limited by the ...
Steinn Gudmundsson, Ines Thiele
94
Voted
BMCBI
2008
99views more  BMCBI 2008»
15 years 2 months ago
NestedMICA as an ab initio protein motif discovery tool
Background: Discovering overrepresented patterns in amino acid sequences is an important step in protein functional element identification. We adapted and extended NestedMICA, an ...
Mutlu Dogruel, Thomas A. Down, Tim J. P. Hubbard