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» OpenFlyData: The Way to Go for Biological Data Integration
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ISBI
2008
IEEE
14 years 8 months ago
Visualizing morphogenesis and growth by temporal interpolation of surface-based 3D atlases
Image-based 3D atlases have been proven to be very useful in biological and medical research. They serve as spatial reference systems that enable researchers to integrate experime...
Chavdar Papazov, Vincent J. Dercksen, Hans Lamecke...
BMCBI
2006
147views more  BMCBI 2006»
13 years 7 months ago
A case study in pathway knowledgebase verification
Background: Biological databases and pathway knowledgebases are proliferating rapidly. We are developing software tools for computer-aided hypothesis design and evaluation, and we...
Stephen A. Racunas, Nigam Shah, Nina V. Fedoroff
BMCBI
2008
135views more  BMCBI 2008»
13 years 7 months ago
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining
Background: Many bioinformatics applications rely on controlled vocabularies or ontologies to consistently interpret and seamlessly integrate information scattered across public r...
Irena Spasic, Daniel Schober, Susanna-Assunta Sans...
SAC
2003
ACM
14 years 21 days ago
Similar_Join: Extending DBMS with a Bio-specific Operator
Existing sequence comparison software applications lack automation, abstraction, performance, and flexibility. Users need a new way of studying and applying sequence comparisons i...
Jake Yue Chen, John V. Carlis
TCBB
2008
95views more  TCBB 2008»
13 years 7 months ago
Solving the Problem of Trans-Genomic Query with Alignment Tables
Abstract-- The trans-genomic query (TGQ) problem -- enabling the free query of biological information, even across genomes -- is a central challenge facing bioinformatics. Solution...
Douglas Stott Parker Jr., Ruey-Lung Hsiao, Yi Xing...