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ALGORITHMICA
2006
163views more  ALGORITHMICA 2006»
13 years 8 months ago
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines
Phylogenetic analysis is an area of computational biology concerned with the reconstruction of evolutionary relationships between organisms, genes, and gene families. Maximum likel...
Thomas M. Keane, Andrew J. Page, Thomas J. Naughto...
CORR
2007
Springer
76views Education» more  CORR 2007»
13 years 8 months ago
Tripartitions do not always discriminate phylogenetic networks
Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of non-treelike evolutionary events, like recombination, hybridization, or later...
Gabriel Cardona, Francesc Rosselló, Gabriel...
COCOON
2005
Springer
14 years 2 months ago
Quartet-Based Phylogeny Reconstruction from Gene Orders
Abstract. Phylogenetic reconstruction from gene-rearrangement data is attracting increasing attention from biologists and computer scientists. Methods used in reconstruction includ...
Tao Liu, Jijun Tang, Bernard M. E. Moret
BMCBI
2006
161views more  BMCBI 2006»
13 years 8 months ago
A novel approach to phylogenetic tree construction using stochastic optimization and clustering
Background: The problem of inferring the evolutionary history and constructing the phylogenetic tree with high performance has become one of the major problems in computational bi...
Ling Qin, Yixin Chen, Yi Pan, Ling Chen
APPML
2002
76views more  APPML 2002»
13 years 8 months ago
Proper gromov transforms of metrics are metrics
In phylogenetic analysis, a standard problem is to approximate a given metric by an additive metric. Here it is shown that, given a metric D defined on some finite set X and a non...
Andreas W. M. Dress