Sciweavers

415 search results - page 74 / 83
» Optimal query complexity bounds for finding graphs
Sort
View
BMCBI
2005
306views more  BMCBI 2005»
13 years 7 months ago
A method for aligning RNA secondary structures and its application to RNA motif detection
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...
TOPLAS
2008
81views more  TOPLAS 2008»
13 years 7 months ago
Size-change termination with difference constraints
lem of inferring termination from such abstract information is not the halting problem for programs and may well be decidable. If this is the case, the decision algorithm forms a &...
Amir M. Ben-Amram
SODA
2003
ACM
106views Algorithms» more  SODA 2003»
13 years 9 months ago
Maintaining all-pairs approximate shortest paths under deletion of edges
We present a hierarchical scheme for efficiently maintaining all-pairs approximate shortest-paths in undirected unweighted graphs under deletions of edges. An α-approximate short...
Surender Baswana, Ramesh Hariharan, Sandeep Sen
BIOCOMP
2009
13 years 8 months ago
Improving Remote Homology Detection Using Sequence Properties and Position Specific Scoring Matrices
Current biological sequence comparison tools frequently fail to recognize matches between homologs when sequence similarity is below the twilight zone of less than 25% sequence id...
Gina Cooper, Michael L. Raymer
STOC
2004
ACM
134views Algorithms» more  STOC 2004»
14 years 8 months ago
Better extractors for better codes?
We present an explicit construction of codes that can be list decoded from a fraction (1 - ) of errors in sub-exponential time and which have rate / logO(1) (1/). This comes close...
Venkatesan Guruswami