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» Optimization Multiple Sequence Alignment Scheme in DC-BTA
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ICIC
2009
Springer
14 years 4 months ago
A Method for Multiple Sequence Alignment Based on Particle Swarm Optimization
Sequence Alignment is a basic information disposal method in Bioinformatics. However, it is difficult to deal with multiple sequence alignment problem(MSA). In this paper, an impro...
Fasheng Xu, Yuehui Chen
GECCO
2008
Springer
165views Optimization» more  GECCO 2008»
13 years 11 months ago
Multiple sequence alignment using a GLOCSA guided genetic algorithm
This paper introduces GLOCSA as a new scoring function to rate multiple sequence alignments. It is intended to be simple, considering the whole alignment at once and reflecting t...
Edgar David Arenas-Díaz, Helga Ochoterena-B...
BMCBI
2010
104views more  BMCBI 2010»
13 years 10 months ago
Parameters for accurate genome alignment
Background: Genome sequence alignments form the basis of much research. Genome alignment depends on various mundane but critical choices, such as how to mask repeats and which sco...
Martin C. Frith, Michiaki Hamada, Paul Horton
ICPP
2007
IEEE
14 years 4 months ago
Efficient Parallel Algorithm for Optimal Three-Sequences Alignment
Sequence alignment is a fundamental problem in the computational biology. Many alignment methods have been proposed in the literature, such as pair-wise sequence alignment (2SA), ...
Chun-Yuan Lin, Chen Tai Huang, Yeh-Ching Chung, Ch...
ISMB
1994
13 years 11 months ago
An Efficient Method for Multiple Sequence Alignment
Multiple sequence alignment has been a useful methodin the study of molecular evolution and sequence-structure relationships. This paper presents a newmethodfor multiple sequence ...
Jin Kim, Sakti Pramanik