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IPPS
2007
IEEE
14 years 1 months ago
Securing Grid Data Transfer Services with Active Network Portals
Widely available and utilized Grid servers are vulnerable to a variety of threats from Denial of Service (DoS) attacks, overloading caused by flash crowds, and compromised client ...
Onur Demir, Michael R. Head, Kanad Ghose, Madhusud...
BMCBI
2010
132views more  BMCBI 2010»
13 years 7 months ago
Data structures and compression algorithms for high-throughput sequencing technologies
Background: High-throughput sequencing (HTS) technologies play important roles in the life sciences by allowing the rapid parallel sequencing of very large numbers of relatively s...
Kenny Daily, Paul Rigor, Scott Christley, Xiaohui ...
EUROPAR
2001
Springer
13 years 12 months ago
Optimal Polling for Latency-Throughput Tradeoffs in Queue-Based Network Interfaces for Clusters
We consider a networking subsystem for message–passing clusters that uses two unidirectional queues for data transfers between the network interface card (NIC) and the lower prot...
Dmitry Ponomarev, Kanad Ghose, Eugeny Saksonov
CLUSTER
2003
IEEE
14 years 23 days ago
A Case Study of Parallel I/O for Biological Sequence Search on Linux Clusters
In this paper we analyze the I/O access patterns of a widely-used biological sequence search tool and implement two variations that employ parallel-I/O for data access based on PV...
Yifeng Zhu, Hong Jiang, Xiao Qin, David R. Swanson
IPPS
1997
IEEE
13 years 11 months ago
External Adjustment of Runtime Parameters in Time Warp Synchronized Parallel Simulators
Several optimizations to the Time Warp synchronization protocol for parallel discrete event simulation have been proposed and studied. Many of these optimizations have included so...
Radharamanan Radhakrishnan, Lantz Moore, Philip A....