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» Optimization of Sequence Queries in Database Systems
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TKDE
2011
330views more  TKDE 2011»
13 years 3 months ago
Effective Navigation of Query Results Based on Concept Hierarchies
— Search queries on biomedical databases, such as PubMed, often return a large number of results, only a small subset of which is relevant to the user. Ranking and categorization...
Abhijith Kashyap, Vagelis Hristidis, Michalis Petr...
BMCBI
2006
195views more  BMCBI 2006»
13 years 8 months ago
Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities
Background: Existing biological databases support a variety of queries such as keyword or definition search. However, they do not provide any measure of relevance for the instance...
Paul Shafer, Timothy Isganitis, Golan Yona
ICPP
2003
IEEE
14 years 2 months ago
Towards Real-time Parallel Processing of Spatial Queries
Spatial databases are entering an era of mass deployment in various real-life applications, especially mobile and location-based services. The real-time processing of spatial quer...
Haibo Hu, Manli Zhu, Dik Lun Lee
SIGMOD
2010
ACM
221views Database» more  SIGMOD 2010»
13 years 9 months ago
Analyzing the energy efficiency of a database server
Rising energy costs in large data centers are driving an agenda for energy-efficient computing. In this paper, we focus on the role of database software in affecting, and, ultimat...
Dimitris Tsirogiannis, Stavros Harizopoulos, Mehul...
BMCBI
2006
95views more  BMCBI 2006»
13 years 8 months ago
Discrete profile comparison using information bottleneck
Sequence homologs are an important source of information about proteins. Amino acid profiles, representing the position-specific mutation probabilities found in profiles, are a ri...
Sean O'Rourke, Gal Chechik, Robin Friedman, Eleaza...