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WABI
2009
Springer
132views Bioinformatics» more  WABI 2009»
14 years 3 months ago
mpscan: Fast Localisation of Multiple Reads in Genomes
Abstract. With Next Generation Sequencers, sequence based transcriptomic or epigenomic assays yield millions of short sequence reads that need to be mapped back on a reference geno...
Eric Rivals, Leena Salmela, Petteri Kiiskinen, Pet...
SIGPLAN
2002
13 years 8 months ago
Write barrier removal by static analysis
We present a new analysis for removing unnecessary write barriers in programs that use generational garbage collection. To our knowledge, this is the first static program analysis...
Karen Zee, Martin C. Rinard
ICSE
2009
IEEE-ACM
14 years 9 months ago
The road not taken: Estimating path execution frequency statically
A variety of compilers, static analyses, and testing frameworks rely heavily on path frequency information. Uses for such information range from optimizing transformations to bug ...
Raymond P. L. Buse, Westley Weimer
ICDE
2003
IEEE
161views Database» more  ICDE 2003»
14 years 10 months ago
Structural Join Order Selection for XML Query Optimization
Structural join operations are central to evaluating queries against XML data, and are typically responsible for consuming a lion's share of the query processing time. Thus, ...
Yuqing Wu, Jignesh M. Patel, H. V. Jagadish
SASO
2008
IEEE
14 years 3 months ago
Cells Are Plausible Targets for High-Level Spatial Languages
—High level languages greatly increase the power of a programmer at the cost of programs that consume more s than those written at a lower level of abstraction. This inefficienc...
Jacob Beal, Jonathan Bachrach