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BMCBI
2005
163views more  BMCBI 2005»
13 years 9 months ago
CoaSim: A flexible environment for simulating genetic data under coalescent models
Background: Coalescent simulations are playing a large role in interpreting large scale intraspecific sequence or polymorphism surveys and for planning and evaluating association ...
Thomas Mailund, Mikkel H. Schierup, Christian N. S...
PEPM
2010
ACM
14 years 6 months ago
Optimizing relational algebra operations using generic equivalence discriminators and lazy products
We show how to efficiently evaluate generic map-filter-product queries, generalizations of select-project-join (SPJ) queries in relational algebra, based on a combination of two...
Fritz Henglein
CCS
2010
ACM
13 years 9 months ago
TASTY: tool for automating secure two-party computations
Secure two-party computation allows two untrusting parties to jointly compute an arbitrary function on their respective private inputs while revealing no information beyond the ou...
Wilko Henecka, Stefan Kögl, Ahmad-Reza Sadegh...
BMCBI
2010
123views more  BMCBI 2010»
13 years 9 months ago
A new protein binding pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction
Background: Predicting which molecules can bind to a given binding site of a protein with known 3D structure is important to decipher the protein function, and useful in drug desi...
Brice Hoffmann, Mikhail Zaslavskiy, Jean-Philippe ...
BMCBI
2008
172views more  BMCBI 2008»
13 years 9 months ago
Compo: composite motif discovery using discrete models
Background: Computational discovery of motifs in biomolecular sequences is an established field, with applications both in the discovery of functional sites in proteins and regula...
Geir Kjetil Sandve, Osman Abul, Finn Drablø...