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BMCBI
2010
101views more  BMCBI 2010»
13 years 8 months ago
Enrichment of homologs in insignificant BLAST hits by co-complex network alignment
Background: Homology is a crucial concept in comparative genomics. The algorithm probably most widely used for homology detection in comparative genomics, is BLAST. Usually a stri...
Like Fokkens, Sandra M. C. Botelho, Jos Boekhorst,...
BMCBI
2010
100views more  BMCBI 2010»
13 years 8 months ago
A robust method for estimating gene expression states using Affymetrix microarray probe level data
Background: Microarray technology is a high-throughput method for measuring the expression levels of thousand of genes simultaneously. The observed intensities combine a non-speci...
Megu Ohtaki, Keiko Otani, Keiko Hiyama, Naomi Kame...
BMCBI
2008
175views more  BMCBI 2008»
13 years 8 months ago
Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces
Background: Protein-protein interactions are ubiquitous and essential for all cellular processes. High-resolution X-ray crystallographic structures of protein complexes can reveal...
Andrew J. Bordner, Andrey A. Gorin
EAAI
2006
189views more  EAAI 2006»
13 years 8 months ago
Evolutionary algorithms for VLSI multi-objective netlist partitioning
The problem of partitioning appears in several areas ranging from VLSI, parallel programming, to molecular biology. The interest in finding an optimal partition especially in VLSI ...
Sadiq M. Sait, Aiman H. El-Maleh, Raslan H. Al-Aba...
PRL
2010
159views more  PRL 2010»
13 years 7 months ago
Creating diverse nearest-neighbour ensembles using simultaneous metaheuristic feature selection
The nearest-neighbour (1NN) classifier has long been used in pattern recognition, exploratory data analysis, and data mining problems. A vital consideration in obtaining good res...
Muhammad Atif Tahir, Jim E. Smith