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» PAPER - Accelerating parallel evaluations of ROCS
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IPPS
2006
IEEE
15 years 10 months ago
Implementation of a programmable array processor architecture for approximate string matching algorithms on FPGAs
Approximate string matching problem is a common and often repeated task in information retrieval and bioinformatics. This paper proposes a generic design of a programmable array p...
Panagiotis D. Michailidis, Konstantinos G. Margari...
149
Voted
IPPS
2006
IEEE
15 years 10 months ago
Towards building a highly-available cluster based model for high performance computing
In recent years, we have witnessed a growing interest in high performance computing (HPC) using a cluster of workstations. However, many challenges remain to be resolved before th...
Azzedine Boukerche, Raed Al-Shaikh, Mirela Sechi M...
176
Voted
IPPS
2006
IEEE
15 years 10 months ago
Multiple sequence alignment by quantum genetic algorithm
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...
L. Abdesslem, M. Soham, B. Mohamed
153
Voted
IPPS
2006
IEEE
15 years 10 months ago
Design and analysis of a multi-dimensional data sampling service for large scale data analysis applications
Sampling is a widely used technique to increase efficiency in database and data mining applications operating on large dataset. In this paper we present a scalable sampling imple...
Xi Zhang, Tahsin M. Kurç, Joel H. Saltz, Sr...
IPPS
2006
IEEE
15 years 10 months ago
Techniques supporting threadprivate in OpenMP
This paper presents the alternatives available to support threadprivate data in OpenMP and evaluates them. We show how current compilation systems rely on custom techniques for im...
Xavier Martorell, Marc González, Alejandro ...