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» PATH: a task for the inference of phylogenies
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JCB
2007
145views more  JCB 2007»
13 years 7 months ago
Confounding Factors in HGT Detection: Statistical Error, Coalescent Effects, and Multiple Solutions
Prokaryotic organisms share genetic material across species boundaries by means of a process known as horizontal gene transfer (HGT). This process has great significance for unde...
Cuong Than, Derek A. Ruths, Hideki Innan, Luay Nak...
SOCIALCOM
2010
13 years 5 months ago
Traffic in Social Media I: Paths Through Information Networks
Wikipedia is used every day by people all around the world, to satisfy a variety of information needs. We crosscorrelate multiple Wikipedia traffic data sets to infer various behav...
Jacob Ratkiewicz, Alessandro Flammini, Filippo Men...
AMAI
2000
Springer
13 years 11 months ago
Using topology for spatial reasoning
Several formalisms have been proposed for qualitative reasoning about regions and their topological relations in space. These formalisms, based on pairwise relations, do not allow...
Boi Faltings
BMCBI
2006
129views more  BMCBI 2006»
13 years 7 months ago
Improved alignment quality by combining evolutionary information, predicted secondary structure and self-organizing maps
Background: Protein sequence alignment is one of the basic tools in bioinformatics. Correct alignments are required for a range of tasks including the derivation of phylogenetic t...
Tomas Ohlson, Varun Aggarwal, Arne Elofsson, Rober...
PACT
2009
Springer
14 years 10 hour ago
Parallel Evidence Propagation on Multicore Processors
In this paper, we design and implement an efficient technique for parallel evidence propagation on state-of-the-art multicore processor systems. Evidence propagation is a major ste...
Yinglong Xia, Xiaojun Feng, Viktor K. Prasanna