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» PGAC: A Parallel Genetic Algorithm for Data Clustering
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IPPS
1998
IEEE
14 years 1 months ago
Partitioned Schedules for Clustered VLIW Architectures
This paper presents results on a new approach to partitioning a modulo-scheduled loop for distributed execution on parallel clusters of functional units organized as a VLIW machin...
Marcio Merino Fernandes, Josep Llosa, Nigel P. Top...
WEA
2005
Springer
176views Algorithms» more  WEA 2005»
14 years 2 months ago
High-Performance Algorithm Engineering for Large-Scale Graph Problems and Computational Biology
Abstract. Many large-scale optimization problems rely on graph theoretic solutions; yet high-performance computing has traditionally focused on regular applications with high degre...
David A. Bader
SDM
2009
SIAM
251views Data Mining» more  SDM 2009»
14 years 6 months ago
High Performance Parallel/Distributed Biclustering Using Barycenter Heuristic.
Biclustering refers to simultaneous clustering of objects and their features. Use of biclustering is gaining momentum in areas such as text mining, gene expression analysis and co...
Alok N. Choudhary, Arifa Nisar, Waseem Ahmad, Wei-...
WSC
1998
13 years 10 months ago
Parallel Implementation of a Molecular Dynamics Simulation Program
We have taken a NIST molecular dynamics simulation program (md3), which was configured as a single sequential process running on a CRAY C90 vector supercomputer, and parallelized ...
Alan Mink, Christophe Bailly
CEC
2007
IEEE
14 years 3 months ago
A co-evolutionary framework for regulatory motif discovery
Abstract— In previous work, we have shown how an evolutionary algorithm with a clustered population can be used to concurrently discover multiple regulatory motifs present within...
Michael A. Lones, Andy M. Tyrrell