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» PROSESS: a protein structure evaluation suite and server
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BMCBI
2008
78views more  BMCBI 2008»
13 years 7 months ago
A new protein linear motif benchmark for multiple sequence alignment software
Background: Linear motifs (LMs) are abundant short regulatory sites used for modulating the functions of many eukaryotic proteins. They play important roles in post-translational ...
Emmanuel Perrodou, Claudia Chica, Olivier Poch, To...
NAR
2010
122views more  NAR 2010»
13 years 1 months ago
ELM: the status of the 2010 eukaryotic linear motif resource
Linear motifs are short segments of multidomain proteins that provide regulatory functions independently of protein tertiary structure. Much of intracellular signalling passes thr...
Cathryn M. Gould, Francesca Diella, Allegra Via, P...
BMCBI
2006
140views more  BMCBI 2006»
13 years 6 months ago
MACSIMS : multiple alignment of complete sequences information management system
Background: In the post-genomic era, systems-level studies are being performed that seek to explain complex biological systems by integrating diverse resources from fields such as...
Julie D. Thompson, Arnaud Muller, Andrew M. Waterh...
BMCBI
2007
147views more  BMCBI 2007»
13 years 7 months ago
Improved residue contact prediction using support vector machines and a large feature set
Background: Predicting protein residue-residue contacts is an important 2D prediction task. It is useful for ab initio structure prediction and understanding protein folding. In s...
Jianlin Cheng, Pierre Baldi
ICDE
2006
IEEE
146views Database» more  ICDE 2006»
14 years 8 months ago
Query Selection Techniques for Efficient Crawling of Structured Web Sources
The high quality, structured data from Web structured sources is invaluable for many applications. Hidden Web databases are not directly crawlable by Web search engines and are on...
Ping Wu, Ji-Rong Wen, Huan Liu, Wei-Ying Ma