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» Pair Programming: Not for Everyone
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BMCBI
2010
120views more  BMCBI 2010»
13 years 9 months ago
Short clones or long clones? A simulation study on the use of paired reads in metagenomics
Background: Metagenomics is the study of environmental samples using sequencing. Rapid advances in sequencing technology are fueling a vast increase in the number and scope of met...
Suparna Mitra, Max Schubach, Daniel H. Huson
CSB
2004
IEEE
208views Bioinformatics» more  CSB 2004»
14 years 22 days ago
Pair Stochastic Tree Adjoining Grammars for Aligning and Predicting Pseudoknot RNA Structures
Motivation: Since the whole genome sequences for many species are currently available, computational predictions of RNA secondary structures and computational identifications of t...
Hiroshi Matsui, Kengo Sato, Yasubumi Sakakibara
UM
2001
Springer
14 years 1 months ago
User Modelling in I-Help: What, Why, When and How
This paper describes user modelling in I-Help, a system to facilitate communication amongst learners. There are two I-Help components: Private and Public Discussions. In the Privat...
Susan Bull, Jim E. Greer, Gordon I. McCalla, Lori ...
BMCBI
2008
110views more  BMCBI 2008»
13 years 9 months ago
Enhancing the prediction of protein pairings between interacting families using orthology information
Background: It has repeatedly been shown that interacting protein families tend to have similar phylogenetic trees. These similarities can be used to predicting the mapping betwee...
José M. G. Izarzugaza, David de Juan, Carle...
ENTCS
2007
98views more  ENTCS 2007»
13 years 9 months ago
Type Systems for Optimizing Stack-based Code
We give a uniform type-systematic account of a number of optimizations and the underlying analyses for a bytecode-like stack-based low-level language, including analysis soundness...
Ando Saabas, Tarmo Uustalu