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IPPS
2010
IEEE
13 years 7 months ago
pFANGS: Parallel high speed sequence mapping for Next Generation 454-roche Sequencing reads
Millions of DNA sequences (reads) are generated by Next Generation Sequencing machines everyday. There is a need for high performance algorithms to map these sequences to the refer...
Sanchit Misra, Ramanathan Narayanan, Wei-keng Liao...
IPPS
2010
IEEE
13 years 7 months ago
MMT: Exploiting fine-grained parallelism in dynamic memory management
Dynamic memory management is one of the most expensive but ubiquitous operations in many C/C++ applications. Additional features such as security checks, while desirable, further w...
Devesh Tiwari, Sanghoon Lee, James Tuck, Yan Solih...
PDP
2003
IEEE
14 years 2 months ago
Automatic Optimisation of Parallel Linear Algebra Routines in Systems with Variable Load
Abstract. In this work an architecture of an automatically tuned linear algebra library proposed in previous works is extended in order to adapt it to platforms where both the CPU ...
Javier Cuenca, Domingo Giménez, José...
ICMI
2004
Springer
157views Biometrics» more  ICMI 2004»
14 years 2 months ago
Collaboration in parallel worlds
We present a novel paradigm for human to human asymmetric collaboration. There is a need for people at geographically separate locations to seamlessly collaborate in real time as ...
Ashutosh Morde, Jun Hou, S. Kicha Ganapathy, Carlo...
ICDE
2009
IEEE
171views Database» more  ICDE 2009»
14 years 3 months ago
CoTS: A Scalable Framework for Parallelizing Frequency Counting over Data Streams
Applications involving analysis of data streams have gained significant popularity and importance. Frequency counting, frequent elements and top-k queries form a class of operato...
Sudipto Das, Shyam Antony, Divyakant Agrawal, Amr ...