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BIOCOMP
2009
13 years 10 months ago
Improving Remote Homology Detection Using Sequence Properties and Position Specific Scoring Matrices
Current biological sequence comparison tools frequently fail to recognize matches between homologs when sequence similarity is below the twilight zone of less than 25% sequence id...
Gina Cooper, Michael L. Raymer
SC
2003
ACM
14 years 2 months ago
A New Parallel Kernel-Independent Fast Multipole Method
We present a new adaptive fast multipole algorithm and its parallel implementation. The algorithm is kernel-independent in the sense that the evaluation of pairwise interactions do...
Lexing Ying, George Biros, Denis Zorin, Harper Lan...
ICPP
2005
IEEE
14 years 2 months ago
Push-Pull: Guided Search DAG Scheduling for Heterogeneous Clusters
Consider a heterogeneous cluster system, consisting of processors with varying processing capabilities and network links with varying bandwidths. Given a DAG application to be sch...
Sang Cheol Kim, Sunggu Lee
HPDC
2007
IEEE
14 years 3 months ago
Precise and realistic utility functions for user-centric performance analysis of schedulers
Utility functions can be used to represent the value users attach to job completion as a function of turnaround time. Most previous scheduling research used simple synthetic repre...
Cynthia Bailey Lee, Allan Snavely
ICTAI
2007
IEEE
14 years 3 months ago
An Adaptive Distributed Ensemble Approach to Mine Concept-Drifting Data Streams
An adaptive boosting ensemble algorithm for classifying homogeneous distributed data streams is presented. The method builds an ensemble of classifiers by using Genetic Programmi...
Gianluigi Folino, Clara Pizzuti, Giandomenico Spez...