127 search results - page 16 / 26 » Parallel Assembler for Fuzzy Genome Sequence Assembly |
CSB
2005
IEEE
14 years 1 months ago
2005
IEEE
We present a software package which can detect homozygous SNPs and indels on a eukaryotic genome scale from millions of shotgun reads. Matching seeds of a few kmer words are found...
BCB
2010
13 years 2 months ago
2010
Growing sequencing and assembly efforts have been met by the advances in high throughput machines. However, the presence of massive amounts of repeats and transposons complicates ...
PLDI
2012
ACM
11 years 10 months ago
2012
ACM
Software-based thread-level parallelization has been widely studied for exploiting data parallelism in purely computational loops to improve program performance on multiprocessors...
BMCBI
2004
13 years 7 months ago
2004
Background: Single-pass, partial sequencing of complementary DNA (cDNA) libraries generates thousands of chromatograms that are processed into high quality expressed sequence tags...
BMCBI
2008
13 years 7 months ago
2008
Background: The use of novel algorithmic techniques is pivotal to many important problems in life science. For example the sequencing of the human genome [1] would not have been p...