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» Parallel Assembler for Fuzzy Genome Sequence Assembly
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GCB
2010
Springer
182views Biometrics» more  GCB 2010»
13 years 5 months ago
Repeat-aware Comparative Genome Assembly
: The current high-throughput sequencing technologies produce gigabytes of data even when prokaryotic genomes are processed. In a subsequent assembly phase, the generated overlappi...
Peter Husemann, Jens Stoye
JPDC
2007
93views more  JPDC 2007»
13 years 7 months ago
Assembling genomes on large-scale parallel computers
Anantharaman Kalyanaraman, Scott J. Emrich, Patric...
AC
2004
Springer
13 years 7 months ago
Shotgun Sequence Assembly
Shotgun sequencing is the most widely used technique for determining the DNA sequence of organisms. It involves breaking up the DNA into many small pieces that can be read by auto...
Mihai Pop
CDB
2004
Springer
172views Database» more  CDB 2004»
14 years 27 days ago
Constraint Database Solutions to the Genome Map Assembly Problem
Abstract. Long DNA sequences have to be cut using restriction enzymes into small fragments whose lengths and/or nucleotide sequences can be analyzed by currently available technolo...
Viswanathan Ramanathan, Peter Z. Revesz