Sciweavers

418 search results - page 47 / 84
» Parallel Computation in Biological Sequence Analysis
Sort
View
ICDCS
2006
IEEE
14 years 1 months ago
ParRescue: Scalable Parallel Algorithm and Implementation for Biclustering over Large Distributed Datasets
Biclustering refers to simultaneously capturing correlations present among subsets of attributes (columns) and records (rows). It is widely used in data mining applications includ...
Jianhong Zhou, Ashfaq A. Khokhar
ISMB
1994
13 years 9 months ago
Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree Grammars
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
Hiroshi Mamitsuka, Naoki Abe
BMCBI
2011
12 years 11 months ago
Proteinortho: Detection of (Co-)Orthologs in Large-Scale Analysis
Background: Orthology analysis is an important part of data analysis in many areas of bioinformatics such as comparative genomics and molecular phylogenetics. The ever-increasing ...
Marcus Lechner, Sven Findeiß, Lydia Steiner,...
GECCO
2003
Springer
14 years 1 months ago
Optimizing the Order of Taxon Addition in Phylogenetic Tree Construction Using Genetic Algorithm
Phylogenetics has gained in public favor for the analysis of DNA sequence data as molecular biology has advanced. Among a number of algorithms for phylogenetics, the fastDNAml is c...
Yong-Hyuk Kim, Seung-Kyu Lee, Byung Ro Moon
ICCS
2001
Springer
14 years 8 days ago
High-Performance Algorithm Engineering for Computational Phylogenetics
Abstract. Phylogeny reconstruction from molecular data poses complex optimization problems: almost all optimization models are NP-hard and thus computationally intractable. Yet app...
Bernard M. E. Moret, David A. Bader, Tandy Warnow