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IPPS
2009
IEEE
14 years 3 months ago
Evaluating the use of GPUs in liver image segmentation and HMMER database searches
In this paper we present the results of parallelizing two life sciences applications, Markov random fieldsbased (MRF) liver segmentation and HMMER’s Viterbi algorithm, using GP...
John Paul Walters, Vidyananth Balu, Suryaprakash K...
IPPS
1998
IEEE
14 years 1 months ago
High Performance Data Mining Using Data Cubes on Parallel Computers
On-Line Analytical Processing techniques are used for data analysis and decision support systems. The multidimensionality of the underlying data is well represented by multidimens...
Sanjay Goil, Alok N. Choudhary
IPPS
2007
IEEE
14 years 3 months ago
High Performance Database Searching with HMMer on FPGAs
1 Profile Hidden Markov Models (profile HMMs) are used as a popular bioinformatics tool for sensitive database searching, e.g. a set of not annotated protein sequences is compared...
Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt
VLDB
1997
ACM
140views Database» more  VLDB 1997»
14 years 29 days ago
Parallel Query Scheduling and Optimization with Time- and Space-Shared Resources
Scheduling query execution plans is a particularly complex problem in hierarchical parallel systems, where each site consists of a collection of local time-shared (e.g., CPU(s) or...
Minos N. Garofalakis, Yannis E. Ioannidis
ISSADS
2005
Springer
14 years 2 months ago
Extending Databases to Precision-Controlled Retrieval of Qualitative Information
A hierarchy is an arrangement of qualitative values in a tree with certain properties. Hierarchies allow to define the confusion conf(r, s) in using qualitative value r instead of ...
Victor-Polo de Gyves, Adolfo Guzmán-Arenas,...