Sciweavers

150 search results - page 6 / 30
» Parallel Generation of Pseudo-Random Sequences
Sort
View
IPPS
2002
IEEE
14 years 10 days ago
On Cost-Optimal Merge of Two Intransitive Sorted Sequences
The problem of merging two intransitive sorted sequences (that is, to generate a sorted total order without the transitive property) is considered. A cost-optimal parallel merging...
Jie Wu, Stephan Olariu
HPDC
2010
IEEE
13 years 8 months ago
MPIPairwiseStatSig: parallel pairwise statistical significance estimation of local sequence alignment
Sequence comparison is considered as a cornerstone application in bioinformatics, which forms the basis of many other applications. In particular, pairwise sequence alignment is a...
Ankit Agrawal, Sanchit Misra, Daniel Honbo, Alok N...
IJNSEC
2008
90views more  IJNSEC 2008»
13 years 7 months ago
Trace Representations and Multi-rate Constructions of Two Classes of Generalized Cyclotomic Sequences
In this paper, two classes of generalized cyclotomic sequences of period pq are reconstructed by means of multirate parallel combinations of binary Legendre sequences which are cl...
Tongjiang Yan, Xiaoni Du, Shuqing Li, Guozhen Xiao
BIOINFORMATICS
2012
11 years 9 months ago
SSuMMo: rapid analysis, comparison and visualization of microbial communities
Motivation: Next-generation sequencing methods are generating increasingly massive datasets, yet still do not fully capture genetic diversity in the richest environments. To under...
Alex L. B. Leach, James P. J. Chong, Kelly R. Rede...
IPPS
2008
IEEE
14 years 1 months ago
Ordered index seed algorithm for intensive DNA sequence comparison
This paper presents a seed-based algorithm for intensive DNA sequence comparison. The novelty comes from the way seeds are used to efficiently generate small ungapped alignments ...
Dominique Lavenier